Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799012.1_cds_XP_016463032.1_5592
CDS Infomation

[gene=LOC107786106] [db_xref=GeneID:107786106] [protein=pentatricopeptide repeat-containing protein At1g74900, mitochondrial] [protein_id=XP_016463032.1] [location=21007..22491] [gbkey=CDS]
Sequence

ATGGTGAACCTGTACAATAGTACACTCCTCAAAGCACCTCTAAATCGCATTTTCATCTCC
CTCCGCCATTTCACCTCTCTTCTACCACCGTCACCACCACAATCGCCGTCACAGTCACCA
CCAGACCCCATCACAATCTCCAACCTCATACATCAAACCAACCCAGAATCATTATCAGAC
ACCCTTCACAACCTCACCCAATGGACCCCTGACCTCGTTCACGCTGTCCTAAAGCGTCTC
TGGAACCACGGCCCTAAAGCCCTCCATTGTTTCAACCTCCTCGATCACCATCGTTCCTAT
GCTCACTCTGCTACAGCCTTTGACCATGCTATTGACATCGCTGCTCGTATGCGCGATTAC
AAGATCGTTTGGAAGCTCGTGGCCCGAATGCAATCTCGGCGACTCGGCCCGAGCCCGAAA
ACATTCGCTATCATCACTGAGAGGTATGTATCTGCTGGGAAAGCTGATAAAGCGTTGAAG
GTTTTCCTGTCTATGCATAAACATGGTTGCCCTCAGGATTTGAATTCTTTCAATGCATTC
CTTGACGTGCTTTGTAAATCTAAACGGGCCGAGATGGCTTATAATTTGTTCAAGATGTTT
AGGAGCAGGTTCAGAGCTGATACGATTAGTTATAACACACTAGCGAACGGGTTTTGTTTA
ATTAAGCGAACACCTAAAGCACAAGAGATTTTGAAAGAAATGGTGGAGAGAGGTCTGAAT
CCCACAATAACTACATATAACATAATGCTTAACGGGTTCTTTAGAGCAGGACAGATTAAG
GAAGCTTGGGAATTCTTTTTGCAGATGAAGAAGAGGAAATGTGATATTGATGTTGTTACT
TACACTACTGTAGTTCACGGATTTGGTGTTGCGGGTGAAGTTGAGAAGGCGCAAAAGGTG
TTCAATGAAATGGTGGGAGCTGGCATACTTCCCTCTGTTGCAACTTATAATGCGCTGATA
CAAGTTTTGTGTAAGAAAGATAGTGTGGAAAATGCTATTTTGGTGTTCGATGAGATGTTG
AGGAAAGGTTATTTGCCGAATGCCACAACTTATAATGCCATTATCAGGGGATTGTGCCAT
GTTGGAAAAATGGACAGGGCTACGGAATATATGGATAAGATGAAAGAGGATGGGTGTGAA
CCAAATGTTCAGACTTATAATGTTGTCATCCGATACTATTGCGATGAAGGGGAAATTGAG
AAGGGCCTGAGGGTGTTTGAGAGGATGAGTACTGGTGATTGCTTACCTAATCTGGATACA
TATAATATTTTGATAAGTACAATGTTTGTTAGGAAAAAATCAGATGATTTATTAGTGGCT
GGGAAACTATTGACAGAAATGGTTGACAGAGGATTTCTTCCTCGAAAATTTACCTTCAAC
CGGGTCCTTAATGGGCTTTTGCTAACTGGTAATCAAGATTTTGCAAAGGAGATTTTGAGG
TTGCTAAGCAAATCTGGCCGCCTCCCCTACCATTTTAAACTGTGA

Peptide Sequence

PEP ID

XP_016463032.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Nicotiana tabacum]
Sequence

MVNLYNSTLLKAPLNRIFISLRHFTSLLPPSPPQSPSQSPPDPITISNLIHQTNPESLSD
TLHNLTQWTPDLVHAVLKRLWNHGPKALHCFNLLDHHRSYAHSATAFDHAIDIAARMRDY
KIVWKLVARMQSRRLGPSPKTFAIITERYVSAGKADKALKVFLSMHKHGCPQDLNSFNAF
LDVLCKSKRAEMAYNLFKMFRSRFRADTISYNTLANGFCLIKRTPKAQEILKEMVERGLN
PTITTYNIMLNGFFRAGQIKEAWEFFLQMKKRKCDIDVVTYTTVVHGFGVAGEVEKAQKV
FNEMVGAGILPSVATYNALIQVLCKKDSVENAILVFDEMLRKGYLPNATTYNAIIRGLCH
VGKMDRATEYMDKMKEDGCEPNVQTYNVVIRYYCDEGEIEKGLRVFERMSTGDCLPNLDT
YNILISTMFVRKKSDDLLVAGKLLTEMVDRGFLPRKFTFNRVLNGLLLTGNQDFAKEILR
LLSKSGRLPYHFKL

Transcript Sequence

Gene sequence data has not been registered.